Registration
Tissue masks, section order, and aligned stack.
THREE-MOUSE INTERACTIVE DEMO
Serial histology becomes a connected cellular atlas.
Explore registration, tissue-supported stain measurements, detected cells, spatial topology, and predicted protein landscapes across mice 4312, 4630, and 6180.
4312 · 25 sections4630 · 24 sections6180 · 19 sections
3D atlas
Interactive serial-section histology and semantic regions.
Stain extraction
Tissue-supported target optical density at 4 µm/px.
Cell boundaries
Single-cell geometry over native histology.
Spatial topology
Connected tissue envelopes and semantic volumes.
Protein expression
Predicted and measured single-cell expression.
Cellular protein atlas
Multi-protein cellular landscapes in 3D, orthogonal, and section views.