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Prepare Module 1 TFBS prediction inputs

Source: R/utils_step1_steps.R
module1_prepare_tfbs_inputs.Rd

Prepare Module 1 TFBS prediction inputs

Usage

module1_prepare_tfbs_inputs(
  omics_data,
  label_col = NULL,
  tf_subset = NULL,
  verbose = TRUE
)

Arguments

omics_data

CraftGRN multiomic object returned by `load_prep_multiomic_data()`.

label_col

Optional metadata column used to rebuild condition matrices.

tf_subset

Optional TF symbols to keep.

verbose

Emit concise progress messages.

Value

A list containing prepared data, condition columns, TFs, and footprint universe.