Assemble, filter, and output final predicted TF-FP-target links — module2_output_predicted_links • craftgrn

Assemble, filter, and output final predicted TF-FP-target links

Usage

module2_output_predicted_links(
  module2_inputs,
  candidates,
  tf_target_corr,
  fp_target_corr,
  output_dir = NULL,
  output_format = c("auto", "parquet", "csv"),
  verbose = TRUE
)

Arguments

module2_inputs: Output from [module2_identify_candidate_links()].
candidates: Candidate table from [module2_link_fp_targets()].
tf_target_corr: TF-target correlation table from [module2_correlate_tf_targets()].
fp_target_corr: FP-target correlation table from [module2_correlate_fp_targets()].
output_dir: Optional output directory.
output_format: One of auto, parquet, or csv.
verbose: Emit concise progress messages.

Value

A Module 2 result list.