fp-tools GUI static preview

Static GUI preview

Explore the fp-tools GUI

This interactive demo shows example inputs, YAML, and run history. It does not read your files or run analyses. To use your own data, install fp-tools and open fp-tools-gui.

1. Choose a commandUse the menu to explore each example.

2. Check the inputsSee which files and sample labels the command needs.

3. Review the YAMLReplace the example paths in your installed GUI.

4. View example historySee how the GUI records commands and output paths.

diff-footprints

Footprint bigWigs

control_rep1_footprints.bw, control_rep2_footprints.bw, treated_rep1_footprints.bw, treated_rep2_footprints.bw

Condition names

control control treated treated

Genome FASTA

hg38.fa

Motif database

jaspar2026_vertebrates

Peaks BED

merged_peaks.bed

Output folder

project/comparisons/control_vs_treated

Example configuration These paths illustrate the required inputs. In your installed GUI, replace them with your files and validate the YAML before running.

Example YAML

Tooldiff-footprints

Samples4

ReportHTML

tool: diff-footprints
signals:
  - control_rep1_footprints.bw
  - control_rep2_footprints.bw
  - treated_rep1_footprints.bw
  - treated_rep2_footprints.bw
cond_names: [control, control, treated, treated]
genome: hg38.fa
peaks: merged_peaks.bed
motif_db: jaspar2026_vertebrates
normalization: none
plot_aggregate: sig
outdir: project/comparisons/control_vs_treated

View example run history

Demo only. No analysis is started.