Static GUI preview

Run footprint workflows from one clean control surface

Choose a command, load an example, review the YAML, and launch the same reproducible workflow used by the command line.

1. Choose commandBulk ATAC, motif reports, variants, pseudobulk, or signatures.
2. Load exampleStart from bundled YAML or paste your own paths.
3. Review YAMLSee the exact config before running.
4. Inspect outputsOpen logs, tables, bigWigs, and HTML reports.

diff-footprints

K562_rep1.bw, K562_rep2.bw, HepG2_rep1.bw...
K562 K562 K562 HepG2 HepG2 HepG2
hg38.fa
jaspar2026_vertebrates
merged_peaks.bed
project/comparisons/K562_vs_HepG2
Guided workflow The GUI keeps the run simple: choose the command, load an example, check the YAML, then launch.

Run

Tooldiff-footprints
Samples6
ReportHTML
tool: diff-footprints
motif_db: jaspar2026_vertebrates
normalization: none
plot_aggregate: sig
Start run
Config is ready. Outputs will appear in Run History.