Output Demo with ENCODE Cancer Cell Lines¶
Select any two of the seven cell lines to inspect differential footprints, motif statistics, logos, and aggregate profiles.
- Choose Condition 1 and Condition 2. Positive changes indicate higher scores in Condition 1.
- Search for a motif or select a point in the volcano plot to inspect it.
- Compare the aggregate curves and replicate agreement alongside the motif's effect size and adjusted p-value (FDR). Use the plot controls to export figures.
In the plot labels, _up indicates higher scores in the named condition.
n.s. marks motifs that do not meet the report's significance and filtering
thresholds.
These reports summarize motif-associated footprint signals. A motif match or score difference alone does not establish that a particular TF is bound.